|
|
|
|
Journal |
1628625 | Kiledjian M, Dreyfuss G. (1992) | Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box. | EMBO J. 11(7):2655-64. |
2533575 | Garcia-Blanco MA, Jamison SF, Sharp PA. (1989) | Identification and purification of a 62,000-dalton protein that binds specifically to the polypyrimidine tract of introns. | Genes Dev. 3(12A):1874-1886. |
3386636 | Swanson MS, Dreyfuss G. (1988) | Classification and purification of proteins of heterogeneous nuclear ribonucleoprotein particles by RNA-binding specificities. | Mol Cell Biol. 8(5):2237-2241. |
7510636 | Burd CG, Dreyfuss G. (1994) | RNA binding specificity of hnRNP A1: significance of hnRNP A1 high-affinity binding sites in pre-mRNA splicing. | EMBO J. 13(5): 1197-1204. |
7512260 | Matunis MJ, Xing J, Dreyfuss G. (1994) | The hnRNP F protein: unique primary structure, nucleic acid-binding properties, and subcellular localization. | Nucleic Acids Res. 22(6): 1059-67. |
7543047 | Tacke R, Manley JL. (1995) | The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities. | EMBO J. 14(14): 3540-3551. |
7585247 | Myer VE, Steitz JA. (1995) | Isolation and characterization of a novel, low abundance hnRNP protein: A0. | RNA. 1(2): 171-182. |
7607214 | Leffers H, Dejgaard K, Celis JE. (1995) | Characterisation of two major cellular poly(rC)-binding human proteins, each containing three K-homologous (KH) domains. | Eur J Biochem. 230(2): 447-453. |
7651409 | Ramchatesingh J, Zahler AM, Neugebauer KM, Roth MB, Cooper TA. (1995) | A subset of SR proteins activates splicing of the cardiac troponin T alternative exon by direct interactions with an exonic enhancer. | Mol Cell Biol. 15(9):4898-4907. |
7673195 | Kajita Y, Nakayama J, Aizawa M, Ishikawa F. (1995) | The UUAG-specific RNA binding protein, heterogeneous nuclear ribonucleoprotein D0. Common modular structure and binding properties of the 2xRBD-Gly family. | J Biol Chem. 270(38): 22167-22175. |
7688265 | Siomi H, Siomi MC, Nussbaum RL, Dreyfuss G. (1993) | The protein product of the fragile X gene, FMR1, has characteristics of an RNA-binding protein. | Cell. 74(2):291-298. |
7972035 | Gao FB, Carson CC, Levine T, Keene JD. (1994) | Selection of a subset of mRNAs from combinatorial 3' untranslated region libraries using neuronal RNA-binding protein Hel-N1. | Proc Natl Acad Sci U S A. 91(23):11207-11211. |
8083209 | Gorlach M, Burd CG, Dreyfuss G. (1994) | The determinants of RNA-binding specificity of the heterogeneous nuclear ribonucleoprotein C proteins. | J Biol Chem. 269(37): 23074-8. |
8174554 | Fackelmayer FO, Dahm K, Renz A, Ramsperger U, Richter A. (1994) | Nucleic-acid-binding properties of hnRNP-U/SAF-A, a nuclear-matrix protein which binds DNA and RNA in vivo and in vitro. | Eur J Biochem. 221(2):749-757. |
8321232 | Ishikawa F, Matunis MJ, Dreyfuss G, Cech TR. (1993) | Nuclear proteins that bind the pre-mRNA 3' splice site sequence r(UUAG/G) and the human telomeric DNA sequence d(TTAGGG)n. | Mol Cell Biol. 13(7): 4301-4310. |
8449401 | Patton JG, Porro EB, Galceran J, Tempst P, Nadal-Ginard B. (1993) | Cloning and characterization of PSF, a novel pre-mRNA splicing factor. | Genes Dev. 7(3):393-406. |
8473331 | Hamilton BJ, Nagy E, Malter JS, Arrick BA, Rigby WF. (1993) | Association of heterogeneous nuclear ribonucleoprotein A1 and C proteins with reiterated AUUUA sequences. | J Biol Chem. 268(12): 8881-7. |
8497264 | Levine TD, Gao F, King PH, Andrews LG, Keene JD. (1993) | Hel-N1: an autoimmune RNA-binding protein with specificity for 3' uridylate-rich untranslated regions of growth factor mRNAs. | Mol Cell Biol. 13(6):3494-3504. |
8558240 | Buckanovich RJ, Yang YY, Darnell RB. (1996) | The onconeural antigen Nova-1 is a neuron-specific RNA-binding protein, the activity of which is inhibited by paraneoplastic antibodies. | J Neurosci. 16(3):1114-1122. |
8576255 | Dember LM, Kim ND, Liu KQ, Anderson P. (1996) | Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities. | J Biol Chem. 271(5):2783-2788. |
8626503 | Ma WJ, Cheng S, Campbell C, Wright A, Furneaux H. (1996) | Cloning and characterization of HuR, a ubiquitously expressed Elav-like protein. | J Biol Chem. 271(14):8144-8151. |
8626712 | Chung S, Jiang L, Cheng S, Furneaux H. (1996) | Purification and properties of HuD, a neuronal RNA-binding protein. | J Biol Chem. 271(19):11518-11524. |
8647811 | DeMaria CT, Brewer G. (1996) | AUF1 binding affinity to A+U-rich elements correlates with rapid mRNA degradation. | J Biol Chem. 271(21): 12179-84. |
8789448 | Timchenko LT, Timchenko NA, Caskey CT, Roberts R. (1996) | Novel proteins with binding specificity for DNA CTG repeats and RNA CUG repeats: implications for myotonic dystrophy. | Hum Mol Genet. 5(1):115-121. |
8798770 | Temsamani J, Pederson T. (1996) | The C-group heterogeneous nuclear ribonucleoprotein proteins bind to the 5' stem-loop of the U2 small nuclear ribonucleoprotein particle. | J Biol Chem. 271(40): 24922-24926. |
8912635 | Bhagavati S, Ghatpande A, Leung B. (1996) | Identification of two nuclear proteins which bind to RNA CUG repeats: significance for myotonic dystrophy. | Biochem Biophys Res Commun. 228(1):55-62. |
8917439 | Dejgaard K, Leffers H. (1996) | Characterisation of the nucleic-acid-binding activity of KH domains. Different properties of different domains. | Eur J Biochem. 241(2):425-431. |
8948631 | Timchenko LT, Miller JW, Timchenko NA, DeVore DR, Datar KV, Lin L, Roberts R, Caskey CT, Swanson MS. (1996) | Identification of a (CUG)n triplet repeat RNA-binding protein and its expression in myotonic dystrophy. | Nucleic Acids Res. 24(22): 4407-4414. |
9037021 | Tacke R, Chen Y, Manley JL. (1997) | Sequence-specific RNA binding by an SR protein requires RS domain phosphorylation: creation of an SRp40-specific splicing enhancer. | Proc Natl Acad Sci U S A. 94(4): 1148-1153. |
9045688 | Chung S, Eckrich M, Perrone-Bizzozero N, Kohn DT, Furneaux H. (1997) | The Elav-like proteins bind to a conserved regulatory element in the 3'-untranslated region of GAP-43 mRNA. | J Biol Chem. 272(10):6593-6598. |
9121425 | Chabot B, Blanchette M, Lapierre I, La Branche H. (1997) | An intron element modulating 5' splice site selection in the hnRNP A1 pre-mRNA interacts with hnRNP A1. | Mol Cell Biol. 17(4):1776-1786. |
9122208 | Holcik M, Liebhaber SA. (1997) | Four highly stable eukaryotic mRNAs assemble 3' untranslated region RNA-protein complexes sharing cis and trans components. | Proc Natl Acad Sci U S A. 94(6):2410-2414. |
9130721 | Gallego ME, Gattoni R, Stevenin J, Marie J, Expert-Bezancon A. (1997) | The SR splicing factors ASF/SF2 and SC35 have antagonistic effects on intronic enhancer-dependent splicing of the beta-tropomyosin alternative exon 6A. | EMBO J. 16(7):1772-1784. |
9154818 | Buckanovich RJ, Darnell RB. (1997) | The neuronal RNA binding protein Nova-1 recognizes specific RNA targets in vitro and in vivo. | Mol Cell Biol. 17(6):3194-3201. |
9155038 | Myer VE, Fan XC, Steitz JA. (1997) | Identification of HuR as a protein implicated in AUUUA-mediated mRNA decay. | EMBO J. 16(8):2130-2139. |
9160751 | Ostareck DH, Ostareck-Lederer A, Wilm M, Thiele BJ, Mann M, Hentze MW. (1997) | mRNA silencing in erythroid differentiation: hnRNP K and hnRNP E1 regulate 15-lipoxygenase translation from the 3' end. | Cell. 16;89(4):597-606. |
9182766 | Berglund JA, Chua K, Abovich N, Reed R, Rosbash M. (1997) | The splicing factor BBP interacts specifically with the pre-mRNA branchpoint sequence UACUAAC. | Cell. 89(5):781-787. |
9214659 | Perez I, Lin CH, McAfee JG, Patton JG. (1997) | Mutation of PTB binding sites causes misregulation of alternative 3' splice site selection in vivo. | RNA. 3(7): 764-778. |
9234723 | Chan RC, Black DL. (1997) | The polypyrimidine tract binding protein binds upstream of neural cell-specific c-src exon N1 to repress the splicing of the intron downstream. | Mol Cell Biol. 17(8):4667-4676. |
9261396 | Tsuchihara K, Tanaka T, Hijikata M, Kuge S, Toyoda H, Nomoto A, Yamamoto N, Shimotohno K. (1997) | Specific interaction of polypyrimidine tract-binding protein with the extreme 3'-terminal structure of the hepatitis C virus genome, the 3'X. | J Virol. 71(9):6720-6726 |
9275159 | Li HP, Zhang X, Duncan R, Comai L, Lai MM. (1997) | Heterogeneous nuclear ribonucleoprotein A1 binds to the transcription-regulatory region of mouse hepatitis virus RNA. | Proc Natl Acad Sci U S A. 94(18): 9544-9549. |
9292499 | Ashiya M, Grabowski PJ. (1997) | A neuron-specific splicing switch mediated by an array of pre-mRNA repressor sites: evidence of a regulatory role for the polypyrimidine tract binding protein and a brain-specific PTB counterpart. | RNA. 3(9):996-1015. |
9341174 | Lin Q, Taylor SJ, Shalloway D. (1997) | Specificity and determinants of Sam68 RNA binding. Implications for the biological function of K homology domains. | J Biol Chem. 272(43):27274-27280. |
9353343 | Hamilton BJ, Burns CM, Nichols RC, Rigby WF. (1997) | Modulation of AUUUA response element binding by heterogeneous nuclear ribonucleoprotein A1 in human T lymphocytes. The roles of cytoplasmic location, transcription, and phosphorylation. | J Biol Chem. 272(45):28732-28741. |
9393875 | Sokolowski M, Zhao C, Tan W, Schwartz S. (1997) | AU-rich mRNA instability elements on human papillomavirus type 1 late mRNAs and c-fos mRNAs interact with the same cellular factors. | Oncogene. 15(19):2303-2319. |
9436904 | Nagel RJ, Lancaster AM, Zahler AM. (1998) | Specific binding of an exonic splicing enhancer by the pre-mRNA splicing factor SRp55. | RNA. 4(1):11-23. |
9436911 | Gooding C, Roberts GC, Smith CW. (1998) | Role of an inhibitory pyrimidine element and polypyrimidine tract binding protein in repression of a regulated alpha-tropomyosin exon. | RNA. 4(1): 85-100. |
9512519 | Berglund JA, Abovich N, Rosbash M. (1998) | A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition. | Genes Dev. 12(6):858-867. |
9546399 | Tacke R, Tohyama M, Ogawa S, Manley JL. (1998) | Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing. | Cell. 93(1): 139-148. |
9649504 | Liu HX, Zhang M, Krainer AR. (1998) | Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins. | Genes Dev. 12(13): 1998-2012. |
9649627 | Soltaninassab SR, McAfee JG, Shahied-Milam L, LeStourgeon WM. (1998) | Oligonucleotide binding specificities of the hnRNP C protein tetramer. | Nucleic Acids Res. 26(14): 3410-3417. |
9685407 | Joseph B, Orlian M, Furneaux H. (1998) | p21(waf1) mRNA contains a conserved element in its 3'-untranslated region that is bound by the Elav-like mRNA-stabilizing proteins. | J Biol Chem. 273(32):20511-20516. |
9710581 | Lou H, Neugebauer KM, Gagel RF, Berget SM. (1998) | Regulation of alternative polyadenylation by U1 snRNPs and SRp20. | Mol Cell Biol. 18(9): 4977-85. |
9740129 | Mayeda A, Munroe SH, Xu RM, Krainer AR. (1998) | Distinct functions of the closely related tandem RNA-recognition motifs of hnRNP A1. | RNA. 4(9):1111-1123. |
9765391 | Gupta AK, Drazba JA, Banerjee AK. (1998) | Specific interaction of heterogeneous nuclear ribonucleoprotein particle U with the leader RNA sequence of vesicular stomatitis virus. | J Virol. 72(11):8532-8540. |
9789075 | Yang YY, Yin GL, Darnell RB. (1998) | The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen targeted in POMA patients with dementia. | Proc Natl Acad Sci U S A. 95(22):13254-13259. |
9826658 | Zheng ZM, Huynen M, Baker CC. (1998) | A pyrimidine-rich exonic splicing suppressor binds multiple RNA splicing factors and inhibits spliceosome assembly. | Proc Natl Acad Sci U S A. 95(24):14088-14093. |
9848651 | Dye BT, Buvoli M, Mayer SA, Lin CH, Patton JG. (1998) | Enhancer elements activate the weak 3' splice site of alpha-tropomyosin exon 2. | RNA. 4(12): 1523-1536. |
9858533 | Lou H, Helfman DM, Gagel RF, Berget SM. (1999) | Polypyrimidine tract-binding protein positively regulates inclusion of an alternative 3'-terminal exon. | Mol Cell Biol. 19(1):78-85. |
9858549 | Del Gatto-Konczak F, Olive M, Gesnel MC, Breathnach R. (1999) | hnRNP A1 recruited to an exon in vivo can function as an exon splicing silencer. | Mol Cell Biol. 19(1):251-260. |
9858550 | Schaal TD, Maniatis T. (1999) | Multiple distinct splicing enhancers in the protein-coding sequences of a constitutively spliced pre-mRNA. | Mol Cell Biol. 19(1): 261-73. |
9880507 | Shih SC, Claffey KP. (1999) | Regulation of human vascular endothelial growth factor mRNA stability in hypoxia by heterogeneous nuclear ribonucleoprotein L. | J Biol Chem. 274(3): 1359-1365. |
9882309 | Sokolowski M, Furneaux H, Schwartz S. (1999) | The inhibitory activity of the AU-rich RNA element in the human papillomavirus type 1 late 3' untranslated region correlates with its affinity for the elav-like HuR protein. | J Virol. 73(2):1080-1091. |
9925777 | Najera I, Krieg M, Karn J. (1999) | Synergistic stimulation of HIV-1 rev-dependent export of unspliced mRNA to the cytoplasm by hnRNP A1. | J Mol Biol. 285(5):1951-1964. |
10022858 | Schaal TD, Maniatis T. (1999) | Selection and characterization of pre-mRNA splicing enhancers: identification of novel SR protein-specific enhancer sequences. | Mol Cell Biol. 19(3): 1705-1719. |
10037806 | Gontarek RR, Gutshall LL, Herold KM, Tsai J, Sathe GM, Mao J, Prescott C, Del Vecchio AM. (1999) | hnRNP C and polypyrimidine tract-binding protein specifically interact with the pyrimidine-rich region within the 3'NTR of the HCV RNA genome. | Nucleic Acids Res. 27(6):1457-1463. |
10072387 | Chen CD, Kobayashi R, Helfman DM. (1999) | Binding of hnRNP H to an exonic splicing silencer is involved in the regulation of alternative splicing of the rat beta-tropomyosin gene. | Genes Dev. 13(5):593-606. |
10075998 | Maurer F, Tierney M, Medcalf RL. (1999) | An AU-rich sequence in the 3'-UTR of plasminogen activator inhibitor type 2 (PAI-2) mRNA promotes PAI-2 mRNA decay and provides a binding site for nuclear HuR. | Nucleic Acids Res. 27(7):1664-1673. |
10094314 | Cavaloc Y, Bourgeois CF, Kister L, Stevenin J. (1999) | The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers. | RNA. 5(3): 468-483. |
10202157 | Blanchette M, Chabot B. (1999) | Modulation of exon skipping by high-affinity hnRNP A1-binding sites and by intron elements that repress splice site utilization. | EMBO J. 18(7): 1939-1952. |
10406810 | Caputi M, Mayeda A, Krainer AR, Zahler AM. (1999) | hnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing. | EMBO J. 18(14):4060-4067. |
10523623 | Bourgeois CF, Popielarz M, Hildwein G, Stevenin J. (1999) | Identification of a bidirectional splicing enhancer: differential involvement of SR proteins in 5' or 3' splice site activation. | Mol Cell Biol. 19(11):7347-7356. |
10523673 | Charroux B, Angelats C, Fasano L, Kerridge S, Vola C. (1999) | The levels of the bancal product, a Drosophila homologue of vertebrate hnRNP K protein, affect cell proliferation and apoptosis in imaginal disc cells. | Mol Cell Biol. 19(11):7846-7856. |
10573156 | Ansari SA, Safak M, Gallia GL, Sawaya BE, Amini S, Khalili K. (1999) | Interaction of YB-1 with human immunodeficiency virus type 1 Tat and TAR RNA modulates viral promoter activity. | J Gen Virol. 80 (Pt 10):2629-2638. |
10629063 | Liu HX, Chew SL, Cartegni L, Zhang MQ, Krainer AR. (2000) | Exonic splicing enhancer motif recognized by human SC35 under splicing conditions. | Mol Cell Biol. 20(3): 1063-1071. |
10676814 | Lewis HA, Musunuru K, Jensen KB, Edo C, Chen H, Darnell RB, Burley SK. (2000) | Sequence-specific RNA binding by a Nova KH domain: implications for paraneoplastic disease and the fragile X syndrome. | Cell. 100(3):323-332. |
10811881 | Jensen KB, Musunuru K, Lewis HA, Burley SK, Darnell RB. (2000) | The tetranucleotide UCAY directs the specific recognition of RNA by the nova K-homology 3 domain. | Proc Natl Acad Sci U S A. 97(11): 5740-5745. |
10848602 | Park S, Myszka DG, Yu M, Littler SJ, Laird-Offringa IA. (2000) | HuD RNA recognition motifs play distinct roles in the formation of a stable complex with AU-rich RNA. | Mol Cell Biol. 20(13):4765-4772. |
10856256 | Conte MR, Grune T, Ghuman J, Kelly G, Ladas A, Matthews S, Curry S. (2000) | Structure of tandem RNA recognition motifs from polypyrimidine tract binding protein reveals novel features of the RRM fold. | EMBO J. 19(12):3132-3141. |
10857750 | Tsui S, Dai T, Roettger S, Schempp W, Salido EC, Yen PH. (2000) | Identification of two novel proteins that interact with germ-cell-specific RNA-binding proteins DAZ and DAZL1. | Genomics. 65(3):266-273. |
10911989 | Chou MY, Underwood JG, Nikolic J, Luu MH, Black DL. (2000) | Multisite RNA binding and release of polypyrimidine tract binding protein during the regulation of c-src neural-specific splicing. | Mol Cell. 5(6):949-957. |
10913178 | Millard SS, Vidal A, Markus M, Koff A. (2000) | A U-rich element in the 5' untranslated region is necessary for the translation of p27 mRNA. | Mol Cell Biol. 20(16):5947-5959. |
10913193 | Derry JJ, Richard S, Valderrama Carvajal H, Ye X, Vasioukhin V, Cochrane AW, Chen T, Tyner AL. (2000) | Sik (BRK) phosphorylates Sam68 in the nucleus and negatively regulates its RNA binding ability. | Mol Cell Biol. 20(16): 6114-6126. |
10931943 | Hofmann Y, Lorson CLL, Stamm S, Androphy EJ, Wirth B. (2000) | Htra2-beta 1 stimulates an exonic splicing enhancer and can restore full-length SMN expression to survival motor neuron 2 (SMN2). | Proc Natl Acad Sci U S A. 97(17): 9618-9623. |
10934202 | Fogel BL, McNally MT. (2000) | A cellular protein, hnRNP H, binds to the negative regulator of splicing element from Rous sarcoma virus. | J Biol Chem. 275(41):32371-32378. |
11003644 | Markovtsov V, Nikolic JM, Goldman JA, Turck CW, Chou MY, Black DL. (2000) | Cooperative assembly of an hnRNP complex induced by a tissue-specific homolog of polypyrimidine tract binding protein. | Mol Cell Biol. 20(20):7463-7479. |
11024030 | Shan J, Moran-Jones K, Munro TP, Kidd GJ, Winzor DJ, Hoek KS, Smith R. (2000) | Binding of an RNA trafficking response element to heterogeneous nuclear ribonucleoproteins A1 and A2. | J Biol Chem. 275(49): 38286-38295. |
11046149 | Wan L, Dockendorff TC, Jongens TA, Dreyfuss G. (2000) | Characterization of dFMR1, a Drosophila melanogaster homolog of the fragile X mental retardation protein. | Mol Cell Biol. 20(22):8536-8547. |
11096110 | Lejeune F, Cavaloc Y, Stevenin J. (2001) | Alternative splicing of intron 3 of the serine/arginine-rich protein 9G8 gene. Identification of flanking exonic splicing enhancers and involvement of 9G8 as a trans-acting factor. | J Biol Chem. 276(11):7850-7858. |
11098054 | Lerga A, Hallier M, Delva L, Orvain C, Gallais I, Marie J, Moreau-Gachelin F. (2001) | Identification of an RNA binding specificity for the potential splicing factor TLS. | J Biol Chem. 276(9):6807-6816. |
11106748 | Forch P, Puig O, Kedersha N, Martinez C, Granneman S, Seraphin B, Anderson P, Valcarcel J. (2000) | The apoptosis-promoting factor TIA-1 is a regulator of alternative pre-mRNA splicing. | Mol Cell. 6(5): 1089-1098. |
11172920 | Sokolowski M, Schwartz S. (2001) | Heterogeneous nuclear ribonucleoprotein C binds exclusively to the functionally important UUUUU-motifs in the human papillomavirus type-1 AU-rich inhibitory element. | Virus Res. 73(2):163-175 |
11278454 | Chung H , Derse D. (2001) | Binding sites for Rev and ASF/SF2 map to a 55-nucleotide purine-rich exonic element in equine infectious anemia virus RNA. | J Biol Chem. 276 (22): 18960-18967. |
11278705 | Thisted T, Lyakhov DL, Liebhaber SA. (2001) | Optimized RNA targets of two closely related triple KH domain proteins, heterogeneous nuclear ribonucleoprotein K and alphaCP-2KL, suggest Distinct modes of RNA recognition. | J Biol Chem. 276(20):17484-17496. |
11285240 | Buratti E, Dork T, Zuccato E, Pagani F, Romano M, Baralle FE. (2001) | Nuclear factor TDP-43 and SR proteins promote in vitro and in vivo CFTR exon 9 skipping. | EMBO J. 20(7):1774-1784. |
11336712 | Huang Y, Steitz JA. (2001) | Splicing factors SRp20 and 9G8 promote the nucleocytoplasmic export of mRNA. | Mol Cell. 7(4):899-905. |
11421362 | Hastings ML, Wilson CM, Munroe SH. (2001) | A purine-rich intronic element enhances alternative splicing of thyroid hormone receptor mRNA. | RNA. 7(6):859-874. |
11438677 | Peled-Zehavi H, Berglund JA, Rosbash M, Frankel AD. (2001) | Recognition of RNA branch point sequences by the KH domain of splicing factor 1 (mammalian branch point binding protein) in a splicing factor complex. | Mol Cell Biol. 21(15):5232-5241. |
11447123 | Stickeler E, Fraser SD, Honig A, Chen AL, Berget SM, Cooper TA. (2001) | The RNA binding protein YB-1 binds A/C-rich exon enhancers and stimulates splicing of the CD44 alternative exon v4. | EMBO J. 20(14):3821-3830. |
11470789 | Buratti E, Baralle FE. (2001) | Characterization and functional implications of the RNA binding properties of nuclear factor TDP-43, a novel splicing regulator of CFTR exon 9. | J Biol Chem. 276(39):36337-36343. |
11514570 | Wilson GM, Sutphen K, Moutafis M, Sinha S, Brewer G. (2001) | Structural remodeling of an A + U-rich RNA element by cation or AUF1 binding. | J Biol Chem. 276(42):38400-38409. |
11526107 | Jacquenet S, Mereau A, Bilodeau PS, Damier L, Stoltzfus CM, Branlant C. (2001) | A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H. | J Biol Chem. 276(44): 40464-75. |
11532944 | Schaeffer C, Bardoni B, Mandel JL, Ehresmann B, Ehresmann C, Moine H. (2001) | The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif. | EMBO J. 20(17): 4803-4813. |
11571276 | Caputi M, Zahler AM. (2001) | Determination of the RNA Binding Specificity of the Heterogeneous Nuclear Ribonucleoprotein (hnRNP) H/H'/F/2H9 Family. | J Biol Chem. 276(47): 43850-43859. |
11575921 | Tange TO, Kjems J. (2001) | SF2/ASF binds to a splicing enhancer in the third HIV-1 tat exon and stimulates U2AF binding independently of the RS domain. | J Mol Biol. 312(4):649-662. |
11598017 | Tange TO, Damgaard CK, Guth S, Valcarcel J, Kjems J. (2001) | The hnRNP A1 protein regulates HIV-1 tat splicing via a novel intron silencer element. | EMBO J. 20(20):5748-5758. |
11602610 | Raghavan A, Robison RL, McNabb J, Miller CR, Williams DA, Bohjanen PR. (2001) | HuA and tristetraprolin are induced following T cell activation and display distinct but overlapping RNA binding specificities. | J Biol Chem. 276(51):47958-47965. |
11691992 | Liu Z, Luyten I, Bottomley MJ, Messias AC, Houngninou-Molango S, Sprangers R, Zanier K, Kramer A, Sattler M. (2001) | Structural basis for recognition of the intron branch site RNA by splicing factor 1. | Science. 294(5544):1098-1102. |
11719186 | Chen CY, Gherzi R, Ong SE, Chan EL, Raijmakers R, Pruijn GJ, Stoecklin G, Moroni C, Mann M, Karin M. (2001) | AU binding proteins recruit the exosome to degrade ARE-containing mRNAs. | Cell. 107(4):451-464. |
11719189 | Darnell JC, Jensen KB, Jin P, Brown V, Warren ST, Darnell RB. (2001) | Fragile X mental retardation protein targets G quartet mRNAs important for neuronal function. | Cell. 107(4): 489-499. |
11751603 | Smith PJ, Spurrell EL, Coakley J, Hinds CJ, Ross RJ, Krainer AR, Chew SL. (2002) | An exonic splicing enhancer in human IGF-I pre-mRNA mediates recognition of alternative exon 5 by the serine-arginine protein splicing factor-2/alternative splicing factor. | Endocrinology. 143(1):146-154. |
11753385 | Perrotti D, Cesi V, Trotta R, Guerzoni C, Santilli G, Campbell K, Iervolino A, Condorelli F, Gambacorti-Passerini C, Caligiuri MA, Calabretta B. (2002) | BCR-ABL suppresses C/EBPalpha expression through inhibitory action of hnRNP E2. | Nat Genet. 30(1):48-58. |
11779509 | Zhu J, Mayeda A, Krainer AR. (2001) | Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins. | Mol Cell. 8(6): 1351-1361. |
11788707 | Yuan X, Davydova N, Conte MR, Curry S, Matthews S. (2002) | Chemical shift mapping of RNA interactions with the polypyrimidine tract binding protein. | Nucleic Acids Res. 30(2):456-462. |
11847131 | Caputi M, Zahler AM. (2002) | SR proteins and hnRNP H regulate the splicing of the HIV-1 tev-specific exon 6D. | EMBO J. 21(4): 845-855. |
11856759 | Lapucci A, Donnini M, Papucci L, Witort E, Tempestini A, Bevilacqua A, Nicolin A, Brewer G, Schiavone N, Capaccioli S. (2002) | AUF1 Is a bcl-2 A+U-rich element-binding protein involved in bcl-2 mRNA destabilization during apoptosis. | J Biol Chem. 277(18):16139-16146. |
11867641 | Expert-Bezancon A, Le Caer JP, Marie J. (2002) | Heterogeneous nuclear ribonucleoprotein (hnRNP) K is a component of an intronic splicing enhancer complex that activates the splicing of the alternative exon 6A from chicken beta-tropomyosin pre-mRNA. | J Biol Chem. 277(19):16614-16623. |
11925564 | Cartegni L, Krainer AR. (2002) | Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1. | Nat Genet. 30(4):377-384. |
11931771 | Charlet-B N, Logan P, Singh G, Cooper TA. (2002) | Dynamic antagonism between ETR-3 and PTB regulates cell type-specific alternative splicing. | Mol Cell. 9(3):649-658. |
12011088 | Yeap BB, Voon DC, Vivian JP, McCulloch RK, Thomson AM, Giles KM, Czyzyk-Krzeska MF, Furneaux H, Wilce MC, Wilce JA, Leedman PJ. (2002) | Novel binding of HuR and poly(C)-binding protein to a conserved UC-rich motif within the 3'-untranslated region of the androgen receptor messenger RNA. | J Biol Chem. 277(30):27183-27192. |
12024014 | Simard MJ, Chabot B. (2002) | SRp30c is a repressor of 3' splice site utilization. | Mol Cell Biol. 22(12): 4001-4010. |
12060656 | Hutchison S, LeBel C, Blanchette M, Chabot B. (2002) | Distinct sets of adjacent heterogeneous nuclear ribonucleoprotein (hnRNP) A1/A2 binding sites control 5' splice site selection in the hnRNP A1 mRNA precursor. | J Biol Chem. 277(33):29745-29752. |
12228232 | Romano M, Marcucci R, Buratti E, Ayala YM, Sebastio G, Baralle FE. (2002) | Regulation of 3' splice site selection in the 844ins68 polymorphism of the cystathionine beta-synthase gene. | J Biol Chem. 277(46):43821-43829. |
12356730 | Iseni F, Garcin D, Nishio M, Kedersha N, Anderson P, Kolakofsky D. (2002) | Sendai virus trailer RNA binds TIAR, a cellular protein involved in virus-induced apoptosis. | EMBO J. 21(19):5141-5150. |
12384599 | Kasashima K, Sakashita E, Saito K, Sakamoto H. (2002) | Complex formation of the neuron-specific ELAV-like Hu RNA-binding proteins. | Nucleic Acids Res. 30(20):4519-4526. |
12403470 | Peng R, Dye BT, Perez I, Barnard DC, Thompson AB, Patton JG. (2002) | PSF and p54nrb bind a conserved stem in U5 snRNA. | RNA. 8(10):1334-1347. |
12403832 | Seong JY, Han J, Park S, Wuttke W, Jarry H, Kim K. (2002) | Exonic splicing enhancer-dependent splicing of the gonadotropin-releasing hormone premessenger ribonucleic acid is mediated by tra2alpha, a 40-kilodalton serine/arginine-rich protein. | Mol Endocrinol. 16(11):2426-2438. |
12406575 | Kamei D, Yamada M. (2003) | Interactions of heterogeneous nuclear ribonucleoprotein D-like protein JKTBP and its domains with high-affinity binding sites. | Gene 298(1):49-57. |
12419250 | Shin C, Manley JL. (2002) | The SR protein SRp38 represses splicing in M phase cells. | Cell. 111(3):407-417. |
12419255 | Marchand V, Mereau A, Jacquenet S, Thomas D, Mougin A, Gattoni R, Stevenin J, Branlant C. (2002) | A Janus splicing regulatory element modulates HIV-1 tat and rev mRNA production by coordination of hnRNP A1 cooperative binding. | J Mol Biol. 323(4): 629-652. |
12426391 | Hou VC, Lersch R, Gee SL, Ponthier JL, Lo AJ, Wu M, Turck CW, Koury M, Krainer AR, Mayeda A, Conboy JG. (2002) | Decrease in hnRNP A/B expression during erythropoiesis mediates a pre-mRNA splicing switch. | EMBO J. 21(22):6195-6204. |
12447348 | Hui J, Stangl K, Lane WS, Bindereif A. (2003) | HnRNP L stimulates splicing of the eNOS gene by binding to variable-length CA repeats. | Nat Struct Biol. 10(1): 33-37. |
12490714 | Itoh M, Haga I, Li QH, Fujisawa J. (2002) | Identification of cellular mRNA targets for RNA-binding protein Sam68. | Nucleic Acids Res. 30(24):5452-5464. |
12509468 | Kim JH, Paek KY, Choi K, Kim TD, Hahm B, Kim KT, Jang SK. (2003) | Heterogeneous nuclear ribonucleoprotein C modulates translation of c-myc mRNA in a cell cycle phase-dependent manner. | Mol Cell Biol. 23(2):708-720. |
12517964 | Kosinski PA, Laughlin J, Singh K, Covey LR. (2003) | A complex containing polypyrimidine tract-binding protein is involved in regulating the stability of CD40 ligand (CD154) mRNA. | J Immunol. 170(2):979-988. |
12549914 | Tran Q, Roesser JR. (2003) | SRp55 is a regulator of calcitonin/CGRP alternative RNA splicing. | Biochemistry. 42(4):951-957. |
12600897 | Skalweit A, Doller A, Huth A, Kahne T, Persson PB, Thiele BJ. (2003) | Posttranscriptional control of renin synthesis: identification of proteins interacting with renin mRNA 3'-untranslated region. | Circ Res. 92(4):419-427. |
12605686 | Wein G, Rossler M, Klug R, Herget T. (2003) | The 3'-UTR of the mRNA coding for the major protein kinase C substrate MARCKS contains a novel CU-rich element interacting with the mRNA stabilizing factors HuD and HuR. | Eur J Biochem. 270(2):350-365. |
12612063 | Rooke N, Markovtsov V, Cagavi E, Black DL. (2003) | Roles for SR proteins and hnRNP A1 in the regulation of c-src exon N1. | Mol Cell Biol. 23(6):1874-1884. |
12649279 | Jiang Z, Tang H, Havlioglu N, Zhang X, Stamm S, Yan R, Wu JY. (2003) | Mutations in tau gene exon 10 associated with FTDP-17 alter the activity of an exonic splicing enhancer to interact with Tra2 beta. | J Biol Chem. 278(21):18997-19007. |
12649496 | Gromak N, Matlin AJ, Cooper TA, Smith CW. (2003) | Antagonistic regulation of alpha-actinin alternative splicing by CELF proteins and polypyrimidine tract binding protein. | RNA. 9(4):443-456. |
12704185 | Sengupta S, Jang BC, Wu MT, Paik JH, Furneaux H, Hla T. (2003) | The RNA-binding protein HuR regulates the expression of cyclooxygenase-2. | J Biol Chem. 278(27):25227-25233. |
12732620 | Pagani F, Buratti E, Stuani C, Baralle FE. (2003) | Missense, nonsense, and neutral mutations define juxtaposed regulatory elements of splicing in cystic fibrosis transmembrane regulator exon 9. | J Biol Chem. 278(29):26580-26588. |
12745094 | Dolzhanskaya N, Sung YJ, Conti J, Currie JR, Denman RB. (2003) | The fragile X mental retardation protein interacts with U-rich RNAs in a yeast three-hybrid system. | Biochem Biophys Res Commun. 305(2):434-441. |
12819194 | Wilson GM, Lu J, Sutphen K, Suarez Y, Sinha S, Brewer B, Villanueva-Feliciano EC, Ysla RM, Charles S, Brewer G. (2003) | Phosphorylation of p40AUF1 regulates binding to A+U-rich mRNA-destabilizing elements and protein-induced changes in ribonucleoprotein structure. | J Biol Chem. 278(35):33039-33048. |
12826680 | Galiana-Arnoux D, Lejeune F, Gesnel MC, Stevenin J, Breathnach R, Del Gatto-Konczak F. (2003) | The CD44 alternative v9 exon contains a splicing enhancer responsive to the SR proteins 9G8, ASF/SF2, and SRp20. | J Biol Chem. 278(35):32943-32953. |
12833158 | Kashima T, Manley JL. (2003) | A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy. | Nat Genet. 34(4): 460-463. |
12900401 | Park-Lee S, Kim S, Laird-Offringa IA. (2003) | Characterization of the interaction between neuronal RNA-binding protein HuD and AU-rich RNA. | J Biol Chem. 278(41):39801-39808. |
14703516 | Zahler AM, Damgaard CK, Kjems J, Caputi M. (2004) | SC35 and heterogeneous nuclear ribonucleoprotein A/B proteins bind to a juxtaposed exonic splicing enhancer/exonic splicing silencer element to regulate HIV-1 tat exon 2 splicing. | J Biol Chem. 279(11): 10077-84. |
14709600 | Stoilov P, Daoud R, Nayler O, Stamm S. (2004) | Human tra2-beta1 autoregulates its protein concentration by influencing alternative splicing of its pre-mRNA. | Hum Mol Genet. 13(5): 509-524. |
14722159 | Kino Y, Mori D, Oma Y, Takeshita Y, Sasagawa N, Ishiura S. (2004) | Muscleblind protein, MBNL1/EXP, binds specifically to CHHG repeats. | Hum. Mol. Genet. 13:495–507. |
14729981 | Buratti E, Muro AF, Giombi M, Gherbassi D, Iaconcig A, Baralle FE. (2004) | RNA folding affects the recruitment of SR proteins by mouse and human polypurinic enhancer elements in the fibronectin EDA exon. | Mol Cell Biol. 24(3):1387-1400. |
15155834 | Christian K, Lang M, Maurel P, Raffalli-Mathieu F. (2004) | Interaction of heterogeneous nuclear ribonucleoprotein A1 with cytochrome P450 2A6 mRNA: implications for post-transcriptional regulation of the CYP2A6 gene. | Mol Pharmacol. 65(6):1405-1414. |
15208309 | Expert-Bezancon A, Sureau A, Durosay P, Salesse R, Groeneveld H, Lecaer JP, Marie J. (2004) | hnRNP A1 and the SR proteins ASF/SF2 and SC35 have antagonistic functions in splicing of beta-tropomyosin exon 6B. | J Biol Chem. 279(37):38249-38259. |
15257297 | Ho TH, Charlet-B N, Poulos MG, Singh G, Swanson MS, Cooper TA. (2004) | Muscleblind proteins regulate alternative splicing. | EMBO J. 23(15): 3103-3112. |
15302913 | Chiodi I, Corioni M, Giordano M, Valgardsdottir R, Ghigna C, Cobianchi F, Xu RM, Riva S, Biamonti G. (2004) | RNA recognition motif 2 directs the recruitment of SF2/ASF to nuclear stress bodies. | Nucleic Acids Res. 32(14): 4127-4136. |
15331611 | Du Z, Yu J, Chen Y, Andino R, James TL. (2004) | Specific recognition of the C-rich strand of human telomeric DNA and the RNA template of human telomerase by the first KH domain of human poly(C)-binding protein-2. | J Biol Chem. 279(46):48126-48134. |
15341728 | Simpson PJ, Monie TP, Szendroi A, Davydova N, Tyzack JK, Conte MR, Read CM, Cary PD, Svergun DI, Konarev PV, Curry S, Matthews S. (2004) | Structure and RNA interactions of the N-terminal RRM domains of PTB. | Structure. 12(9):1631-1643. |
15457527 | Meisner NC, Hackermuller J, Uhl V, Aszodi A, Jaritz M, Auer M. (2004) | mRNA openers and closers: modulating AU-rich element-controlled mRNA stability by a molecular switch in mRNA secondary structure. | Chembiochem. 5(10):1432-1447. |
15496424 | Kralovicova J, Houngninou-Molango S, Kramer A, Vorechovsky I. (2004) | Branch site haplotypes that control alternative splicing. | Hum Mol Genet. 13(24):3189-3202. |
15514164 | Thiele BJ, Doller A, Kahne T, Pregla R, Hetzer R, Regitz-Zagrosek V. (2004) | RNA-binding proteins heterogeneous nuclear ribonucleoprotein A1, E1, and K are involved in post-transcriptional control of collagen I and III synthesis. | Circ Res. 95(11):1058-1066. |
15657417 | Faustino NA, Cooper TA. (2005) | Identification of putative new splicing targets for ETR-3 using sequences identified by systematic evolution of ligands by exponential enrichment. | Mol Cell Biol. 25 (3): 879-887. |
15798212 | Gabut M, Mine M, Marsac C, Brivet M, Tazi J, Soret J. (2005) | The SR protein SC35 is responsible for aberrant splicing of the E1alpha pyruvate dehydrogenase mRNA in a case of mental retardation with lactic acidosis. | Mol Cell Biol. 25(8):3286-3294. |
15805463 | Darnell JC, Fraser CE, Mostovetsky O, Stefani G, Jones TA, Eddy SR, Darnell RB. (2005) | Kissing complex RNAs mediate interaction between the Fragile-X mental retardation protein KH2 domain and brain polyribosomes. | Genes Dev. 19(8): 903-918. |
15809297 | Fialcowitz EJ, Brewer BY, Keenan BP, Wilson GM. (2005) | A hairpin-like structure within an AU-rich mRNA-destabilizing element regulates trans-factor binding selectivity and mRNA decay kinetics. | J Biol Chem. 280(23):22406-22417. |
15826655 | Ayala YM, Pantano S, D'Ambrogio A, Buratti E, Brindisi A, Marchetti C, Romano M, Baralle FE. (2005) | Human, Drosophila, and C.elegans TDP43: nucleic acid binding properties and splicing regulatory function. | J Mol Biol. 348(3):575-588. |
15828859 | Han K, Yeo G, An P, Burge CB, Grabowski PJ. (2005) | A combinatorial code for splicing silencing: UAGG and GGGG motifs. | PLoS Biol. 3(5):e158. |
15840818 | Amir-Ahmady B, Boutz PL, Markovtsov V, Phillips ML, Black DL. (2005) | Exon repression by polypyrimidine tract binding protein. | RNA. 11(5):699-716. |
15889141 | Hui J, Hung LH, Heiner M, Schreiner S, Neumuller N, Reither G, Haas SA, Bindereif A. (2005) | Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing. | EMBO J. 24(11): 1988-1998. |
15967798 | Thomson AM, Cahill CM, Cho HH, Kassachau KD, Epis MR, Bridges KR, Leedman PJ, Rogers JT. (2005) | The acute box cis-element in human heavy ferritin mRNA 5'-untranslated region is a unique translation enhancer that binds poly(C)-binding proteins. | J Biol Chem. 280(34):30032-30045. |
16000324 | Venables JP, Bourgeois CF, Dalgliesh C, Kister L, Stevenin J, Elliott DJ. (2005) | Up-regulation of the ubiquitous alternative splicing factor Tra2beta causes inclusion of a germ cell-specific exon. | Hum Mol Genet. 14(16):2289-22303. |
16001081 | Rothrock CR, House AE, Lynch KW. (2005) | HnRNP L represses exon splicing via a regulated exonic splicing silencer. | EMBO J. 24(15): 2792-2802. |
16006558 | Zalfa F, Adinolfi S, Napoli I, Kuhn-Holsken E, Urlaub H, Achsel T, Pastore A, Bagni C. (2005) | Fragile X mental retardation protein (FMRP) binds specifically to the brain cytoplasmic RNAs BC1/BC200 via a novel RNA-binding motif. | J Biol Chem. 280(39): 33403-33410. |
16091628 | Suswam EA, Li YY, Mahtani H, King PH. (2005) | Novel DNA-binding properties of the RNA-binding protein TIAR. | Nucleic Acids Res. 33(14):4507-4518. |
16109372 | Izquierdo JM, Majos N, Bonnal S, Martinez C, Castelo R, Guigo R, Bilbao D, Valcarcel J. (2005) | Regulation of Fas alternative splicing by antagonistic effects of TIA-1 and PTB on exon definition. | Mol Cell. 19(4):475-484. |
16126846 | Linker K, Pautz A, Fechir M, Hubrich T, Greeve J, Kleinert H. (2005) | Involvement of KSRP in the post-transcriptional regulation of human iNOS expression-complex interplay of KSRP with TTP and HuR. | Nucleic Acids Res. 33(15):4813-4827. |
16157593 | Buratti E, Brindisi A, Giombi M, Tisminetzky S, Ayala YM, Baralle FE. (2005) | TDP-43 binds heterogeneous nuclear ribonucleoprotein A/B through its C-terminal tail: an important region for the inhibition of cystic fibrosis transmembrane conductance regulator exon 9 splicing. | J Biol Chem. 280(45):37572-37584. |
16168373 | Katsanou V, Papadaki O, Milatos S, Blackshear PJ, Anderson P, Kollias G, Kontoyiannis DL. (2005) | HuR as a negative posttranscriptional modulator in inflammation. | Mol Cell. 19(6):777-789. |
16171461 | Alkan SA, Martincic K, Milcarek C. (2006) | The hnRNPs F and H2 bind to similar sequences to influence gene expression. | Biochem J. 393(Pt 1):361-371. |
16179478 | Oberstrass FC, Auweter SD, Erat M, Hargous Y, Henning A, Wenter P, Reymond L, Amir-Ahmady B, Pitsch S, Black DL, Allain FH. (2005) | Structure of PTB bound to RNA: specific binding and implications for splicing regulation. | Science. 309(5743):2054-2057. |
16249178 | Park E, Han J, Son GH, Lee MS, Chung S, Park SH, Park K, Lee KH, Choi S, Seong JY, Kim K. (2006) | Cooperative actions of Tra2alpha with 9G8 and SRp30c in the RNA splicing of the gonadotropin-releasing hormone gene transcript. | J Biol Chem. 281(1):401-409. |
16254078 | Mercado PA, Ayala YM, Romano M, Buratti E, Baralle FE. (2005) | Depletion of TDP 43 overrides the need for exonic and intronic splicing enhancers in the human apoA-II gene. | Nucleic Acids Res. 33(18):6000-6010. |
16260624 | Lin JC, Tarn WY. (2005) | Exon selection in alpha-tropomyosin mRNA is regulated by the antagonistic action of RBM4 and PTB. | Mol Cell Biol. 25(22): 10111-10121. |
16289864 | Sommer S, Cui Y, Brewer G, Fuqua SA. (2005) | The c-Yes 3'-UTR contains adenine/uridine-rich elements that bind AUF1 and HuR involved in mRNA decay in breast cancer cells. | J Steroid Biochem Mol Biol. 97(3):219-229. |
16385450 | Cartegni L, Hastings ML, Calarco JA, de Stanchina E, Krainer AR. (2006) | Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2. | Am J Hum Genet. 78(1):63-77. |
16396608 | Martinez-Contreras R, Fisette JF, Nasim FU, Madden R, Cordeau M, Chabot B. (2006) | Intronic binding sites for hnRNP A/B and hnRNP F/H proteins stimulate pre-mRNA splicing. | PLoS Biol. 4(2):e21. |
16458894 | Ayala YM, Pagani F, Baralle FE. (2006) | TDP43 depletion rescues aberrant CFTR exon 9 skipping. | FEBS Lett. 580(5):1339-1344. |
16508950 | Shen Q, Fan L, Newburger PE. (2006) | Nuclease sensitive element binding protein 1 associates with the selenocysteine insertion sequence and functions in mammalian selenoprotein translation. | J Cell Physiol. 207(3):775-783. |
16537540 | Ponthier JL, Schluepen C, Chen W, Lersch RA, Gee SL, Hou VC, Lo AJ, Short SA, Chasis JA, Winkelmann JC, Conboy JG. (2006) | Fox-2 splicing factor binds to a conserved intron motif to promote inclusion of protein 4.1R alternative exon 16. | J Biol Chem. 281(18): 12468-12474. |
16548521 | Landsberg MJ, Moran-Jones K, Smith R. (2006) | Molecular recognition of an RNA trafficking element by heterogeneous nuclear ribonucleoprotein A2. | Biochemistry. 45(12):3943-3951. |
16611940 | Spena S, Tenchini ML, Buratti E. (2006) | Cryptic splice site usage in exon 7 of the human fibrinogen Bbeta-chain gene is regulated by a naturally silent SF2/ASF binding site within this exon. | RNA. 12(6):948-958. |
16777844 | Kar A, Havlioglu N, Tarn WY, Wu JY. (2006) | RBM4 interacts with an intronic element and stimulates tau exon 10 inclusion. | J Biol Chem. 281(34): 24479-24488. |
16787927 | Pullmann R Jr, Abdelmohsen K, Lal A, Martindale JL, Ladner RD, Gorospe M. (2006) | Differential stability of thymidylate synthase 3'-untranslated region polymorphic variants regulated by AUF1. | J Biol Chem. 281(33):23456-23463. |
16790528 | Massiello A, Roesser JR, Chalfant CE. (2006) | SAP155 Binds to ceramide-responsive RNA cis-element 1 and regulates the alternative 5' splice site selection of Bcl-x pre-mRNA. | FASEB J. 20(10): 1680-1682. |
16819831 | Zanotti KJ, Lackey PE, Evans GL, Mihailescu MR. (2006) | Thermodynamics of the fragile X mental retardation protein RGG box interactions with G quartet forming RNA. | Biochemistry. 45(27):8319-8330. |
16825284 | Smith PJ, Zhang C, Wang J, Chew SL, Zhang MQ, Krainer AR. (2006) | An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers. | Hum Mol Genet. 15(16):2490-2508. |
16834569 | Sagliocco F, Laloo B, Cosson B, Laborde L, Castroviejo M, Rosenbaum J, Ripoche J, Grosset C. (2006) | The ARE-associated factor AUF1 binds poly(A) in vitro in competition with PABP. | Biochem J. 400(2):337-347. |
16854432 | Messias AC, Harnisch C, Ostareck-Lederer A, Sattler M, Ostareck DH. (2006) | The DICE-binding activity of KH domain 3 of hnRNP K is affected by c-Src-mediated tyrosine phosphorylation. | J Mol Biol. 361(3):470-481. |
16885237 | Dominguez C, Allain FH. (2006) | NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition. | Nucleic Acids Res. 34(13):3634-3645. |
16890199 | Izquierdo JM. (2006) | Control of the ATP synthase beta subunit expression by RNA-binding proteins TIA-1, TIAR, and HuR. | Biochem Biophys Res Commun. 348(2):703-711. |
16938098 | Marquis J, Paillard L, Audic Y, Cosson B, Danos O, Le Bec C, Osborne HB. (2006) | CUG-BP1/CELF1 requires UGU-rich sequences for high-affinity binding. | Biochem J. 400(2): 291-301. |
16943417 | Wu JY, Kar A, Kuo D, Yu B, Havlioglu N. (2006) | SRp54 (SFRS11), a regulator for tau exon 10 alternative splicing identified by an expression cloning strategy. | Mol Cell Biol. 26(18):6739-6747. |
16950790 | Pautz A, Linker K, Hubrich T, Korhonen R, Altenhofer S, Kleinert H. (2006) | The polypyrimidine tract-binding protein (PTB) is involved in the post-transcriptional regulation of human inducible nitric oxide synthase expression. | J Biol Chem. 281(43):32294-32302. |
16982681 | Sauliere J, Sureau A, Expert-Bezancon A, Marie J. (2006) | The polypyrimidine tract binding protein (PTB) represses splicing of exon 6B from the beta-tropomyosin pre-mRNA by directly interfering with the binding of the U2AF65 subunit. | Mol Cell Biol. 26(23):8755-8769. |
16990281 | Hallay H, Locker N, Ayadi L, Ropers D, Guittet E, Branlant C. (2006) | Biochemical and NMR study on the competition between proteins SC35, SRp40, and heterogeneous nuclear ribonucleoprotein A1 at the HIV-1 Tat exon 2 splicing site. | J Biol Chem. 281(48):37159-37174. |
17030625 | Torrisani J, Unterberger A, Tendulkar SR, Shikimi K, Szyf M. (2007) | AUF1 cell cycle variations define genomic DNA methylation by regulation of DNMT1 mRNA stability. | Mol Cell Biol. 27(1):395-410. |
17035636 | Zhu H, Hasman RA, Barron VA, Luo G, Lou H. (2006) | A nuclear function of Hu proteins as neuron-specific alternative RNA processing regulators. | Mol Biol Cell. 17(12):5105-5114. |
17101796 | Zhou HL, Baraniak AP, Lou H. (2007) | Role for Fox-1/Fox-2 in mediating the neuronal pathway of calcitonin/calcitonin gene-related peptide alternative RNA processing. | Mol Cell Biol. 27(3): 830-841. |
17144911 | Kammler S, Otte M, Hauber I, Kjems J, Hauber J, Schaal H. (2006) | The strength of the HIV-1 3' splice sites affects Rev function. | Retrovirology. 3:89. |
17287399 | Lewis SM, Veyrier A, Hosszu Ungureanu N, Bonnal S, Vagner S, Holcik M. (2007) | Subcellular relocalization of a trans-acting factor regulates XIAP IRES-dependent translation. | Mol Biol Cell. 18(4):1302-1311. |
17337441 | Schaub MC, Lopez SR, Caputi M. (2007) | Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes. | J Biol Chem. 282(18):13617-13626. |
17353911 | Donev R, Newall A, Thome J, Sheer D. (2007) | A role for SC35 and hnRNPA1 in the determination of amyloid precursor protein isoforms. | Mol Psychiatry. 12(7):681-690. |
17437720 | Garcia-Mayoral MF, Hollingworth D, Masino L, Diaz-Moreno I, Kelly G, Gherzi R, Chou CF, Chen CY, Ramos A. (2007) | The structure of the C-terminal KH domains of KSRP reveals a noncanonical motif important for mRNA degradation. | Structure. 15(4):485-498. |
17451601 | Woolaway K, Asai K, Emili A, Cochrane A. (2007) | hnRNP E1 and E2 have distinct roles in modulating HIV-1 gene expression. | Retrovirology. 4:28. |
17466948 | Reyes R, Izquierdo JM. (2007) | The RNA-binding protein PTB exerts translational control on 3'-untranslated region of the mRNA for the ATP synthase beta-subunit. | Biochem Biophys Res Commun. 357(4):1107-1112. |
17488725 | Izquierdo JM, Valcarcel J. (2007) | Two isoforms of the T-cell intracellular antigen 1 (TIA-1) splicing factor display distinct splicing regulation activities. Control of TIA-1 isoform ratio by TIA-1-related protein. | J Biol Chem. 282(27):19410-19417. |
17507659 | Hall-Pogar T, Liang S, Hague LK, Lutz CS. (2007) | Specific trans-acting proteins interact with auxiliary RNA polyadenylation elements in the COX-2 3'-UTR. | RNA. 13(7):1103-1115. |
17548433 | Paradis C, Cloutier P, Shkreta L, Toutant J, Klarskov K, Chabot B. (2007) | hnRNP I/PTB can antagonize the splicing repressor activity of SRp30c. | RNA 13: 1287-1300. |
17548472 | Dormoy-Raclet V, Menard I, Clair E, Kurban G, Mazroui R, Di Marco S, von Roretz C, Pause A, Gallouzi IE. (2007) | The RNA-binding protein HuR promotes cell migration and cell invasion by stabilizing the beta-actin mRNA in a U-rich-element-dependent manner. | Mol Cell Biol. 27(15):5365-5380. |
17558416 | Guil S, Caceres JF. (2007) | The multifunctional RNA-binding protein hnRNP A1 is required for processing of miR-18a. | Nat Struct Mol Biol. 14(7): 591-596. |
17567613 | Wang E, Dimova N, Cambi F. (2007) | PLP/DM20 ratio is regulated by hnRNPH and F and a novel G-rich enhancer in oligodendrocytes. | Nucleic Acids Res. 35(12):4164-4178. |
17576688 | Buratti E, Stuani C, De Prato G, Baralle FE. (2007) | SR protein-mediated inhibition of CFTR exon 9 inclusion: molecular characterization of the intronic splicing silencer. | Nucleic Acids Res. 35(13):4359-4368. |
17580305 | McAlinden A, Liang L, Mukudai Y, Imamura T, Sandell LJ. (2007) | Nuclear protein TIA-1 regulates COL2A1 alternative splicing and interacts with precursor mRNA and genomic DNA. | J Biol Chem. 282(33):24444-24454. |
17592047 | Matlin AJ, Southby J, Gooding C, Smith CW. (2007) | Repression of alpha-actinin SM exon splicing by assisted binding of PTB to the polypyrimidine tract. | RNA. 13(8):1214-1223. |
17609276 | Toyoda H, Franco D, Fujita K, Paul AV, Wimmer E. (2007) | Replication of poliovirus requires binding of the poly(rC) binding protein to the cloverleaf as well as to the adjacent C-rich spacer sequence between the cloverleaf and the internal ribosomal entry site. | J Virol. 81(18):10017-10028. |
17655233 | Beuth B, Garcia-Mayoral MF, Taylor IA, Ramos A. (2007) | Scaffold-independent analysis of RNA-protein interactions: the Nova-1 KH3-RNA complex. | J Am Chem Soc. 129(33):10205-10210. |
17664280 | Melton AA, Jackson J, Wang J, Lynch KW. (2007) | Combinatorial control of signal-induced exon repression by hnRNP L and PSF. | Mol Cell Biol. 27(19): 6972-6984. |
17668007 | Tintaru AM, Hautbergue GM, Hounslow AM, Hung ML, Lian LY, Craven CJ, Wilson SA. (2007) | Structural and functional analysis of RNA and TAP binding to SF2/ASF. | EMBO Rep. 8(8):756-762. |
17682065 | Kim HS, Kuwano Y, Zhan M, Pullmann R Jr, Mazan-Mamczarz K, Li H, Kedersha N, Anderson P, Wilce MC, Gorospe M, Wilce JA. (2007) | Elucidation of a C-rich signature motif in target mRNAs of RNA-binding protein TIAR. | Mol Cell Biol. 27(19):6806-6817. |
17698501 | Dhar D, Roy S, Das S. (2007) | Translational control of the interferon regulatory factor 2 mRNA by IRES element. | Nucleic Acids Res. 35(16):5409-5421. |
17702765 | Yuan Y, Compton SA, Sobczak K, Stenberg MG, Thornton CA, Griffith JD, Swanson MS. (2007) | Muscleblind-like 1 interacts with RNA hairpins in splicing target and pathogenic RNAs. | Nucleic Acids Res. 35(16): 5474-5486. |
17764653 | Rho J, Choi S, Jung CR, Im DS. (2007) | Arginine methylation of Sam68 and SLM proteins negatively regulates their poly(U) RNA binding activity. | Arch Biochem Biophys. 466(1):49-57. |
17869320 | Zhao X, Fay J, Lambkin H, Schwartz S. (2007) | Identification of a 17-nucleotide splicing enhancer in HPV-16 L1 that counteracts the effect of multiple hnRNP A1-binding splicing silencers. | Virology. 369(2):351-363. |
17908789 | Winzen R, Thakur BK, Dittrich-Breiholz O, Shah M, Redich N, Dhamija S, Kracht M, Holtmann H. (2007) | Functional analysis of KSRP interaction with the AU-rich element of interleukin-8 and identification of inflammatory mRNA targets. | Mol Cell Biol. 27(23):8388-8400. |
17913700 | Novoyatleva T, Heinrich B, Tang Y, Benderska N, Butchbach ME, Lorson CL, Lorson MA, Ben-Dov C, Fehlbaum P, Bracco L, Burghes AH, Bollen M, Stamm S.(2008) | Protein phosphatase 1 binds to the RNA recognition motif of several splicing factors and regulates alternative pre-mRNA processing. | Hum Mol Genet. 17(1):52-70. |
17925491 | Eiring AM, Neviani P, Santhanam R, Oaks JJ, Chang JS, Notari M, Willis W, Gambacorti-Passerini C, Volinia S, Marcucci G, Caligiuri MA, Leone GW, Perrotti D. (2008) | Identification of novel posttranscriptional targets of the BCR/ABL oncoprotein by ribonomics: requirement of E2F3 for BCR/ABL leukemogenesis. | Blood. 111(2):816-828. |
17928403 | Lee PT, Liao PC, Chang WC, Tseng JT. (2007) | Epidermal growth factor increases the interaction between nucleolin and heterogeneous nuclear ribonucleoprotein K/poly(C) binding protein 1 complex to regulate the gastrin mRNA turnover. | Mol Biol Cell. 18(12):5004-5013. |
17942744 | Warf MB, Berglund JA. (2007) | MBNL binds similar RNA structures in the CUG repeats of myotonic dystrophy and its pre-mRNA substrate cardiac troponin T. | RNA. 13(12): 2238-2251. |
17950949 | Cheunim T, Zhang J, Milligan SG, McPhillips MG, Graham SV. (2008) | The alternative splicing factor hnRNP A1 is up-regulated during virus-infected epithelial cell differentiation and binds the human papillomavirus type 16 late regulatory element. | Virus Res. 131(2):189-198. |
17965020 | Buxade M, Morrice N, Krebs DL, Proud CG. (2008) | The PSF.p54nrb complex is a novel Mnk substrate that binds the mRNA for tumor necrosis factor alpha. | J Biol Chem. 283(1):57-65. |
18039683 | Mori D, Sasagawa N, Kino Y, Ishiura S. (2008) | Quantitative analysis of CUG-BP1 binding to RNA repeats. | J Biochem. 143(3):377-383. |
18075498 | Fraser DJ, Phillips AO, Zhang X, van Roeyen CR, Muehlenberg P, En-Nia A, Mertens PR. (2008) | Y-box protein-1 controls transforming growth factor-beta1 translation in proximal tubular cells. | Kidney Int. 73(6):724-732. |
18272582 | Exline CM, Feng Z, Stoltzfus CM. (2008) | Negative and positive mRNA splicing elements act competitively to regulate human immunodeficiency virus type 1 vif gene expression. | J Virol. 82(8): 3921-3931. |
18315555 | Tardos JG, Eisenreich A, Deikus G, Bechhofer DH, Chandradas S, Zafar U, Rauch U, Bogdanov VY. (2008) | SR proteins ASF/SF2 and SRp55 participate in tissue factor biosynthesis in human monocytic cells. | J Thromb Haemost. 6(5):877-884. |
18371932 | Hua Y, Vickers TA, Okunola HL, Bennett CF, Krainer AR. (2008) | Antisense masking of an hnRNP A1/A2 intronic splicing silencer corrects SMN2 splicing in transgenic mice. | Am J Hum Genet. 82(4):834-848. |
18391021 | Goina E, Skoko N, Pagani F. (2008) | Binding of DAZAP1 and hnRNPA1/A2 to an exonic splicing silencer in a natural BRCA1 exon 18 mutant. | Mol Cell Biol. 28(11):3850-3860. |
18463097 | Izquierdo JM. (2008) | Hu antigen R (HuR) functions as an alternative pre-mRNA splicing regulator of Fas apoptosis-promoting receptor on exon definition. | J Biol Chem. 283(27):19077-19084. |
18503770 | Skoko N, Baralle M, Buratti E, Baralle FE. (2008) | The pathological splicing mutation c.6792C>G in NF1 exon 37 causes a change of tenancy between antagonistic splicing factors. | FEBS Lett. 582(15):2231-2236. |
18534987 | Cloutier P, Toutant J, Shkreta L, Goekjian S, Revil T, Chabot B. (2008) | Antagonistic effects of the SRp30c protein and cryptic 5' splice sites on the alternative splicing of the apoptotic regulator Bcl-x. | J Biol Chem. 283(31):21315-21324. |
18573872 | Zhou HL, Lou H. (2008) | Repression of prespliceosome complex formation at two distinct steps by Fox-1/Fox-2 proteins. | Mol Cell Biol. 28(17): 5507-5516. |
18583400 | Nechama M, Ben-Dov IZ, Briata P, Gherzi R, Naveh-Many T. (2008) | The mRNA decay promoting factor K-homology splicing regulator protein post-transcriptionally determines parathyroid hormone mRNA levels. | FASEB J. 22(10):3458-3468. |
18597733 | Baralle M, Pastor T, Bussani E, Pagani F. (2008) | Influence of Friedreich ataxia GAA noncoding repeat expansions on pre-mRNA processing. | Am J Hum Genet. 83(1): 77-88. |
18644987 | Scott GK, Marx C, Berger CE, Saunders LR, Verdin E, Schafer S, Jung M, Benz CC. (2008) | Destabilization of ERBB2 transcripts by targeting 3' untranslated region messenger RNA associated HuR and histone deacetylase-6. | Mol Cancer Res. 6(7):1250-1258. |
18650551 | Palanisamy V, Park NJ, Wang J, Wong DT. (2008) | AUF1 and HuR proteins stabilize interleukin-8 mRNA in human saliva. | J Dent Res. 87(8):772-776. |
18653529 | Didiot MC, Tian Z, Schaeffer C, Subramanian M, Mandel JL, Moine H. (2008) | The G-quartet containing FMRP binding site in FMR1 mRNA is a potent exonic splicing enhancer. | Nucleic Acids Res. 36(15): 4902-4912. |
18663000 | Zhou A, Ou AC, Cho A, Benz EJ Jr, Huang SC. (2008) | Novel splicing factor RBM25 modulates Bcl-x pre-mRNA 5' splice site selection. | Mol Cell Biol. 28(19): 5924-5936. |
18684992 | Garcia-Mayoral MF, Diaz-Moreno I, Hollingworth D, Ramos A. (2008) | The sequence selectivity of KSRP explains its flexibility in the recognition of the RNA targets. | Nucleic Acids Res. 36(16):5290-5296. |
18719244 | Topp JD, Jackson J, Melton AA, Lynch KW. (2008) | A cell-based screen for splicing regulators identifies hnRNP LL as a distinct signal-induced repressor of CD45 variable exon 4. | RNA. 14(10): 2038-2049. |
18776329 | Takahama K, Kino K, Arai S, Kurokawa R, Oyoshi T. (2008) | Identification of RNA binding specificity for the TET-family proteins. | Nucleic Acids Symp Ser (Oxf). (52):213-214. |
18794844 | Feng Y, Chen M, Manley JL. (2008) | Phosphorylation switches the general splicing repressor SRp38 to a sequence-specific activator. | Nat Struct Mol Biol. 15(10):1040-1048. |
18806275 | Masuda A, Shen XM, Ito M, Matsuura T, Engel AG, Ohno K. (2008) | hnRNP H enhances skipping of a nonfunctional exon P3A in CHRNA1 and a mutation disrupting its binding causes congenital myasthenic syndrome. | Hum Mol Genet. 17(24):4022-4035. |
18929541 | Zell R, Ihle Y, Effenberger M, Seitz S, Wutzler P, Gorlach M. (2008) | Interaction of poly(rC)-binding protein 2 domains KH1 and KH3 with coxsackievirus RNA. | Biochem Biophys Res Commun. 377(2):500-503. |
19016857 | Raponi M, Buratti E, Llorian M, Stuani C, Smith CW, Baralle D. (2008) | Polypyrimidine tract binding protein regulates lternative splicing of an aberrant pseudoexon in NF1. | FEBS J. 275(24): 6101-6108. |
19111562 | Goncalves V, Theisen P, Antunes O, Medeira A, Ramos JS, Jordan P, Isidro G. (2009) | A missense mutation in the APC tumor suppressor gene disrupts an ASF/SF2 splicing enhancer motif and causes pathogenic skipping of exon 14. | Mutat Res. 662(1-2): 33-36. |
19124611 | Rossbach O, Hung LH, Schreiner S, Grishina I, Heiner M, Hui J, Bindereif A. (2009) | Auto- and cross-regulation of the hnRNP L proteins by alternative splicing. | Mol Cell Biol. 29(6): 1442-1451. |
19147685 | Bian Y, Masuda A, Matsuura T, Ito M, Okushin K, Engel AG, Ohno K. (2009) | Tannic acid facilitates expression of the polypyrimidine tract binding protein and alleviates deleterious inclusion of CHRNA1 exon P3A due to an hnRNP H-disrupting mutation in congenital myasthenic syndrome. | Hum Mol Genet. 18(7):1229-1237. |
19298794 | Lee DH, Lim MH, Youn DY, Jung SE, Ahn YS, Tsujimoto Y, Lee JH. (2009) | hnRNP L binds to CA repeats in the 3'UTR of bcl-2 mRNA. | Biochem Biophys Res Commun. 382(3): 583-587. |
19304800 | Loughlin FE, Mansfield RE, Vaz PM, McGrath AP, Setiyaputra S, Gamsjaeger R, Chen ES, Morris BJ, Guss JM, Mackay JP. (2009) | The zinc fingers of the SR-like protein ZRANB2 are single-stranded RNA-binding domains that recognize 5' splice site-like sequences. | Proc Natl Acad Sci U S A. 106(14): 5581-5586. |
19339348 | Choi EY, Pintel D. (2009) | Splicing of the large intron present in the non-structural gene of minute virus of mice (MVM) is governed by TIA-1/TIAR binding downstream of the non-consensus donor. | J Virol. 83(12):6306-6311 |
19404736 | Millevoi S, Bernat S, Telly D, Fouque F, Gladieff L, Favre G, Vagner S, Toulas C. (2009) | The c.5242C>A BRCA1 missense variant induces exon skipping by increasing splicing repressors binding. | Breast Cancer Res Treat. |
19458619 | Trabucchi M, Briata P, Garcia-Mayoral M, Haase AD, Filipowicz W, Ramos A, Gherzi R, Rosenfeld MG. (2009) | The RNA-binding protein KSRP promotes the biogenesis of a subset of microRNAs. | Nature. 459(7249):1010-1014. |
19561594 | Ray D, Kazan H, Chan ET, Pena Castillo L, Chaudhry S, Talukder S, Blencowe BJ, Morris Q, Hughes TR. (2009) | Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins. | Nat Biotechnol. 27(7):667-670. |
19564422 | Tang ZZ, Zheng S, Nikolic J, Black DL. (2009) | Developmental control of CaV1.2 L-type calcium channel splicing by Fox proteins. | Mol Cell Biol. 29(17):4757-4765. |
19667073 | Okunola HL, Krainer AR. (2009) | Cooperative-binding and splicing-repressive properties of hnRNP A1. | Mol Cell Biol. 29(20):5620-5631. |
19843576 | Chandradas S, Deikus G, Tardos JG, Bogdanov VY. (2010) | Antagonistic roles of four SR proteins in the biosynthesis of alternatively spliced tissue factor transcripts in monocytic cells. | J Leukoc Biol. 87(1):147-152. |
19910374 | Haque A, Buratti E, Baralle FE. (2010) | Functional properties and evolutionary splicing constraints on a composite exonic regulatory element of splicing in CFTR exon 12. | Nucleic Acids Res. 38(2):647-659. |
19926721 | Fisette JF, Toutant J, Dugre-Brisson S, Desgroseillers L, Chabot B. (2010) | hnRNP A1 and hnRNP H can collaborate to modulate 5' splice site selection. | RNA. 16(1):228-238. |
19946215 | Heiner M, Hui J, Schreiner S, Hung LH, Bindereif A. (2010) | HnRNP L-mediated regulation of mammalian alternative splicing by interference with splice site recognition. | RNA Biol. 7(1):56-64. |
20100605 | Russo A, Siciliano G, Catillo M, Giangrande C, Amoresano A, Pucci P, Pietropaolo C, Russo G. (2010) | hnRNP H1 and intronic G runs in the splicing control of the human rpL3 gene. | Biochim Biophys Acta. 1799(5-6):419-428. |
20631008 | Dujardin G, Buratti E, Charlet-Berguerand N, Martins de Araujo M, Mbopda A, Le Jossic-Corcos C, Pagani F, Ferec C, Corcos L. (2010) | CELF proteins regulate CFTR pre-mRNA splicing: essential role of the divergent domain of ETR-3. | Nucleic Acids Res. 38(20):7273-7285. |
To signal us escaped articles or annotation slips, please fill the forms on the SpliceAid main page.
INTRONI.IT©